Agree with everyone, definitely do not use 5200.
I guess I'm the odd ball. Post shipping, I had to put my flybridge back together. The windscreen was a PIA to caulk, and then I had to caulk around all of the railing bases and around the radar arch. I looked at "marine silicone" sealant at $30 a tube at WM, then walked next door to Home Depot. Found their waterproof silicone bathroom sealant looked to be the same at $6, so bought a couple of tubes of it. Looks great, and no issues to date as I wash with a direct stream.
Regardless, tape off both sides of where you need the sealant, that's how you end up with a straight, clean look. Apply the sealant where the two surfaces meet, then use your finger to both compact and smooth the surface. I let mine cure for a couple of days, then peeled off the tape - and it looked like it was done at the factory.
The key ingredients are prep and taping...